Peer-reviewed publications--full list
* Scroll down to see publications by research theme
Lake Tanganyika Ecosystem Project
Lukens N, Kraemer B, Constant V, Hamann E, Michel E, Socci A, Vadeboncoer Y, & McIntyre PB. 2017. Animals and their epibiota as net autotrophs: Size scaling of epibiotic metabolism on snail shells. Freshwater Science 2017: 36(2) xx. DOI: 10.1086/691438
Cohen AS, Gergurich EL, Kraemer BM, McGlue MM, McIntyre PB, Russell JM, Simmons JD, & Swarzenski PW. 2016. Climate warming reduces fish production and benthic habitat in Lake Tanganyika, one of the world’s most biodiverse freshwater ecosystems. Proceedings of the National Academy of Sciences 113: 9563–9568.
Kelly B, McIntyre PB, Mtiti E & Vadeboncoeur Y. 2017. Stable isotopes reveal nitrogen loading to Lake Tanganyika from remote shoreline villages. Environmental Management: 59: 264-273. doi:10.1007/s00267-016-0787-y
Kraemer BM, Hook S, Huttula T, Kotilainen P, O’Reilly CM, Peltonen A, Plisnier P-D, Sarvala J, Tamatamah R, Vadeboncoeur Y, Wehrli B & McIntyre PB. 2015. Century-long warming trends in the upper water column of Lake Tanganyika. PLoS One 10: e0132490.
Meyer JR, Michel E, McIntyre PB, Huntington B, Long D, & Lara G. 2011. Scale-dependent processes of community assembly in African rift lake. Freshwater Biology 56: 2082-2093.
Vadeboncoeur Y, McIntyre PB, & Vander Zanden MJ. 2011. Borders of biodiversity: life at the edge of the world's Great Lakes. BioScience 61: 526-537.
Corman J, McIntyre PB, Kuboja B, Mbemba W, Fink D, Wheeler CW, Gans C, Michel E, & Flecker AS. 2010. Upwelling couples chemical and biological dynamics across the littoral and pelagic zones of Lake Tanganyika, East Africa. Limnology & Oceanography 55: 214-224.
Marijnissen S, Michel E, Cleary D, & McIntyre PB. 2009. Ecology and conservation status of the endemic freshwater crabs of Lake Tanganyika. Biodiversity & Conservation 18: 1555-1573.
Wagner CE*, McIntyre PB*, Smith K, Michel E, & Gilbert D. 2009. Diet predicts intestine length in Lake Tanganyika’s cichlid fishes. Functional Ecology 23: 1122-1131.
Michel EM, McIntyre PB, & Chan J. 2007. A snail’s pace sets a snail’s space: movement rates of Lavigeria in Lake Tanganyika. Journal of Molluscan Studies 73: 195-198.
McIntyre PB, Michel E, & Olsgard M. 2006. Top-down and bottom-up controls on periphyton biomass and productivity in Lake Tanganyika. Limnology and Oceanography 51: 1514-1523.
McIntyre PB, et al. 2005. Individual- and assemblage-level effects of anthropogenic sedimentation on snails in Lake Tanganyika. Conservation Biology 19: 171-181.
Cohen AS, Gergurich EL, Kraemer BM, McGlue MM, McIntyre PB, Russell JM, Simmons JD, & Swarzenski PW. 2016. Climate warming reduces fish production and benthic habitat in Lake Tanganyika, one of the world’s most biodiverse freshwater ecosystems. Proceedings of the National Academy of Sciences 113: 9563–9568.
Kelly B, McIntyre PB, Mtiti E & Vadeboncoeur Y. 2017. Stable isotopes reveal nitrogen loading to Lake Tanganyika from remote shoreline villages. Environmental Management: 59: 264-273. doi:10.1007/s00267-016-0787-y
Kraemer BM, Hook S, Huttula T, Kotilainen P, O’Reilly CM, Peltonen A, Plisnier P-D, Sarvala J, Tamatamah R, Vadeboncoeur Y, Wehrli B & McIntyre PB. 2015. Century-long warming trends in the upper water column of Lake Tanganyika. PLoS One 10: e0132490.
Meyer JR, Michel E, McIntyre PB, Huntington B, Long D, & Lara G. 2011. Scale-dependent processes of community assembly in African rift lake. Freshwater Biology 56: 2082-2093.
Vadeboncoeur Y, McIntyre PB, & Vander Zanden MJ. 2011. Borders of biodiversity: life at the edge of the world's Great Lakes. BioScience 61: 526-537.
Corman J, McIntyre PB, Kuboja B, Mbemba W, Fink D, Wheeler CW, Gans C, Michel E, & Flecker AS. 2010. Upwelling couples chemical and biological dynamics across the littoral and pelagic zones of Lake Tanganyika, East Africa. Limnology & Oceanography 55: 214-224.
Marijnissen S, Michel E, Cleary D, & McIntyre PB. 2009. Ecology and conservation status of the endemic freshwater crabs of Lake Tanganyika. Biodiversity & Conservation 18: 1555-1573.
Wagner CE*, McIntyre PB*, Smith K, Michel E, & Gilbert D. 2009. Diet predicts intestine length in Lake Tanganyika’s cichlid fishes. Functional Ecology 23: 1122-1131.
Michel EM, McIntyre PB, & Chan J. 2007. A snail’s pace sets a snail’s space: movement rates of Lavigeria in Lake Tanganyika. Journal of Molluscan Studies 73: 195-198.
McIntyre PB, Michel E, & Olsgard M. 2006. Top-down and bottom-up controls on periphyton biomass and productivity in Lake Tanganyika. Limnology and Oceanography 51: 1514-1523.
McIntyre PB, et al. 2005. Individual- and assemblage-level effects of anthropogenic sedimentation on snails in Lake Tanganyika. Conservation Biology 19: 171-181.
Great Lakes Connectivity
Moody AT, Neeson TM, Wangen S, Dischler J, Diebel MW, Herbert M, Khoury M, Yacobson E, Doran PJ, Ferris MC, O'Hanley JR, & McIntyre PB. 2016. Pet project or best project? Online decision support tools for prioritizing barrier removals in the Great Lakes and beyond. Fisheries, in press.
Neeson TM, Smith S, Allan JD, & McIntyre PB. 2016. Prioritizing ecological restoration among sites in multi-stressor landscapes. Ecological Applications 26: 1785–1796.
Neeson TM, Ferris MC, Diebel MW, Doran PJ, O’Hanley JR, & McIntyre PB. 2015. Enhancing ecosystem restoration efficiency through spatial and temporal coordination. Proceedings of the National Academy of Sciences 112: 6236–6241.
Januchowski-Hartley S, Diebel MH, Doran PA, & McIntyre PB. 2014. Predicting road culvert passability for migratory fishes. Diversity and Distributions 20: 1414-1424.
Januchowski-Hartley S, McIntyre PB, Diebel M, & Doran PJ. 2013. Restoring aquatic ecosystem connectivity requires expanding inventories of both dams and road crossings. Frontiers in Ecology & Environment 11: 211-217.
Neeson TM, Smith S, Allan JD, & McIntyre PB. 2016. Prioritizing ecological restoration among sites in multi-stressor landscapes. Ecological Applications 26: 1785–1796.
Neeson TM, Ferris MC, Diebel MW, Doran PJ, O’Hanley JR, & McIntyre PB. 2015. Enhancing ecosystem restoration efficiency through spatial and temporal coordination. Proceedings of the National Academy of Sciences 112: 6236–6241.
Januchowski-Hartley S, Diebel MH, Doran PA, & McIntyre PB. 2014. Predicting road culvert passability for migratory fishes. Diversity and Distributions 20: 1414-1424.
Januchowski-Hartley S, McIntyre PB, Diebel M, & Doran PJ. 2013. Restoring aquatic ecosystem connectivity requires expanding inventories of both dams and road crossings. Frontiers in Ecology & Environment 11: 211-217.
Conservation of Native Stream Gobies in the Hawaiian Archipelago
Alda F, Gagne R, Walter R, Hogan JD, Moody K, Zink F, McIntyre PB, Gilliam JF, Blum MJ. 2016. Colonization and demographic expansion of freshwater fauna across the Hawaiian Archipelago. Journal of Evolutionary Biology, in press.
Gagne RB, Heins D, McIntyre PB, Gilliam J, & Blum MJ. 2016. Mutual dilution of infection by an introduced parasite in native and invasive stream fishes across Hawaii. Parasitology, doi:10.1017/S0031182016001001
Hain EF, Lamphere BA, Blum MJ, McIntyre PB, Nelson SAC, & Gilliam JF. 2016. Comparison of visual survey and mark–recapture population estimates of a benthic fish in Hawaii. Transactions of the American Fisheries Society 145: 878-887.
Hogan JD, Kozdon R, Blum MJ, Gilliam JF, Valley JF, & McIntyre PB. 2016. Reconstructing larval performance and habitat use in an amphidromous goby using otolith increments and microchemistry. Journal of Fish Biology, in press.
Gagne R, Hogan JD, Pracheil BP, McIntyre PB, Hain E, Gilliam J, & Blum M. 2015. Spread of an introduced parasite across the Hawaiian archipelago independent of its introduced host. Freshwater Biology 60: 311-322.
Hogan JD, Blum MJ, Gilliam JF, Bickford N, & McIntyre PB. 2014. Consequences of alternative dispersal strategies in a putatively amphidromous fish. Ecology 95: 2397-2408.
Walter RP, Hogan JD, Blum MJ, Gagne RB, Hain EF, Gilliam JF, & McIntyre PB. 2012. Climate change and conservation of amphidromous fishes endemic to Hawaiian streams. Endangered Species Research 16: 261-272.
Gagne RB, Heins D, McIntyre PB, Gilliam J, & Blum MJ. 2016. Mutual dilution of infection by an introduced parasite in native and invasive stream fishes across Hawaii. Parasitology, doi:10.1017/S0031182016001001
Hain EF, Lamphere BA, Blum MJ, McIntyre PB, Nelson SAC, & Gilliam JF. 2016. Comparison of visual survey and mark–recapture population estimates of a benthic fish in Hawaii. Transactions of the American Fisheries Society 145: 878-887.
Hogan JD, Kozdon R, Blum MJ, Gilliam JF, Valley JF, & McIntyre PB. 2016. Reconstructing larval performance and habitat use in an amphidromous goby using otolith increments and microchemistry. Journal of Fish Biology, in press.
Gagne R, Hogan JD, Pracheil BP, McIntyre PB, Hain E, Gilliam J, & Blum M. 2015. Spread of an introduced parasite across the Hawaiian archipelago independent of its introduced host. Freshwater Biology 60: 311-322.
Hogan JD, Blum MJ, Gilliam JF, Bickford N, & McIntyre PB. 2014. Consequences of alternative dispersal strategies in a putatively amphidromous fish. Ecology 95: 2397-2408.
Walter RP, Hogan JD, Blum MJ, Gagne RB, Hain EF, Gilliam JF, & McIntyre PB. 2012. Climate change and conservation of amphidromous fishes endemic to Hawaiian streams. Endangered Species Research 16: 261-272.
Great Lakes Fish Migrations
Blazer V, Walsh H, Braham R, Hahn C, Mazik P, & McIntyre PB. 2016. Tumors in white suckers from Lake Michigan tributaries: pathology and prevalence. Journal of Fish Diseases, doi:10.1111/jfd.12520.
Childress E & McIntyre PB. 2016. Life history traits modulate ecosystem-level effects of nutrient subsidies from fish migrations. Ecosphere 7: e01301.
Childress ES, Papke R, & McIntyre PB. 2016. Spawning success and early life history of longnose suckers in Great Lakes tributaries. Ecology of Freshwater Fish 25: 393–404.
Childress E, & McIntyre PB. 2015. Multiple nutrient subsidy pathways from a spawning migration of iteroparous fish. Freshwater Biology 60: 490-499.
Lyons J, Rypel AL, Rasmussen PW, Burzynski TE, Eggold BT, Myers JT, Paoli TJ, & McIntyre PB. 2015. Trends in the reproductive phenology of two Great Lakes fishes. Transactions of the American Fisheries Society 144 1263-1274.
Oele DL, Hogan JD, & McIntyre PB. 2015. Chemical tracking of northern pike migrations: if we restore access to breeding habitat, will they come? Journal of Great Lakes Research 41: 853-61
Oele DL, Lawson ZJ, & McIntyre PB. 2015. Precision and bias in aging Northern Pike: comparisons among four calcified structures. North American Journal of Fisheries Management 35: 1177-1184.
Childress E, Allan JD, & McIntyre PB. 2014. Nutrient subsidies from native migratory fish enhance productivity in Great Lakes tributaries. Ecosystems 17: 522-534.
Burtner A, McIntyre PB, Allan JD, & Kashian D. 2011. The influence of land use and potamodromous fish on ecosystem function in Lake Superior tributaries. Journal of Great Lakes Research 37: 521-527.
Childress E & McIntyre PB. 2016. Life history traits modulate ecosystem-level effects of nutrient subsidies from fish migrations. Ecosphere 7: e01301.
Childress ES, Papke R, & McIntyre PB. 2016. Spawning success and early life history of longnose suckers in Great Lakes tributaries. Ecology of Freshwater Fish 25: 393–404.
Childress E, & McIntyre PB. 2015. Multiple nutrient subsidy pathways from a spawning migration of iteroparous fish. Freshwater Biology 60: 490-499.
Lyons J, Rypel AL, Rasmussen PW, Burzynski TE, Eggold BT, Myers JT, Paoli TJ, & McIntyre PB. 2015. Trends in the reproductive phenology of two Great Lakes fishes. Transactions of the American Fisheries Society 144 1263-1274.
Oele DL, Hogan JD, & McIntyre PB. 2015. Chemical tracking of northern pike migrations: if we restore access to breeding habitat, will they come? Journal of Great Lakes Research 41: 853-61
Oele DL, Lawson ZJ, & McIntyre PB. 2015. Precision and bias in aging Northern Pike: comparisons among four calcified structures. North American Journal of Fisheries Management 35: 1177-1184.
Childress E, Allan JD, & McIntyre PB. 2014. Nutrient subsidies from native migratory fish enhance productivity in Great Lakes tributaries. Ecosystems 17: 522-534.
Burtner A, McIntyre PB, Allan JD, & Kashian D. 2011. The influence of land use and potamodromous fish on ecosystem function in Lake Superior tributaries. Journal of Great Lakes Research 37: 521-527.
Global Threats
Hermoso V, Januchowski-Hartley S, Linke S, Dudgeon D, Petry P, & McIntyre PB. 2017. Optimal allocation of species assessments to guide conservation of biodiversity in a rapidly changing world. Global Change Biology, in press.
Kraemer BK, Chandra S, Dell A, Dix M, Kuusisto E, Livingstone D, Schladow G, Silow E,
Sitoki L, Tamatamah R & McIntyre PB. 2016. A metabolic approach to understanding global patterns in the response of lake ecosystems to warming. Global Change Biology, in press.
McIntyre PB*, Reidy Liermann C*, & Revenga C. 2016. Linking freshwater fishery management to global food security and biodiversity conservation. Proceedings of the National Academy of Sciences 113: 12880-12885.
Winemiller KO, McIntyre PB, & 39 others. 2016. Balancing hydropower and biodiversity in the Amazon, Congo and Mekong. Science 351: 128-129.
Kraemer BM, Anneville O, Chandra S, Dix M, Kuusisto E, Livingstone DM, Rimmer A, Schladow SG, Silow E, Sitoki LM, Tamatamah R, Vadeboncoeur Y, & McIntyre PB. 2015. Morphometry and average temperature affect lake stratification responses to climate change, Geophysical Research Letters 42, doi:10.1002/ 2015GL064097.
O’Reilly CM, et al. 2015. Rapid and highly variable warming of lake surface waters around the globe. Geophysical Research Letters 42 doi:10.1002/2015GL066235.
Martinuzzi S, Januchowski-Hartley SR, Pracheil BM, McIntyre PB, Plantinga AJ, Lewis DJ & Radeloff V. 2014. Threats and opportunities for freshwater conservation under future land-use change scenarios in the United States. Global Change Biology 20: 113-124.
Vörösmarty CJ*, McIntyre PB*, Gessner MO, Dudgeon D, Prusevich A, Green P, Glidden S, Bunn SE, Sullivan CA, Reidy Liermann C, & Davies PM. 2010. Global threats to human water security and river biodiversity. Nature 467: 555-561.
Kraemer BK, Chandra S, Dell A, Dix M, Kuusisto E, Livingstone D, Schladow G, Silow E,
Sitoki L, Tamatamah R & McIntyre PB. 2016. A metabolic approach to understanding global patterns in the response of lake ecosystems to warming. Global Change Biology, in press.
McIntyre PB*, Reidy Liermann C*, & Revenga C. 2016. Linking freshwater fishery management to global food security and biodiversity conservation. Proceedings of the National Academy of Sciences 113: 12880-12885.
Winemiller KO, McIntyre PB, & 39 others. 2016. Balancing hydropower and biodiversity in the Amazon, Congo and Mekong. Science 351: 128-129.
Kraemer BM, Anneville O, Chandra S, Dix M, Kuusisto E, Livingstone DM, Rimmer A, Schladow SG, Silow E, Sitoki LM, Tamatamah R, Vadeboncoeur Y, & McIntyre PB. 2015. Morphometry and average temperature affect lake stratification responses to climate change, Geophysical Research Letters 42, doi:10.1002/ 2015GL064097.
O’Reilly CM, et al. 2015. Rapid and highly variable warming of lake surface waters around the globe. Geophysical Research Letters 42 doi:10.1002/2015GL066235.
Martinuzzi S, Januchowski-Hartley SR, Pracheil BM, McIntyre PB, Plantinga AJ, Lewis DJ & Radeloff V. 2014. Threats and opportunities for freshwater conservation under future land-use change scenarios in the United States. Global Change Biology 20: 113-124.
Vörösmarty CJ*, McIntyre PB*, Gessner MO, Dudgeon D, Prusevich A, Green P, Glidden S, Bunn SE, Sullivan CA, Reidy Liermann C, & Davies PM. 2010. Global threats to human water security and river biodiversity. Nature 467: 555-561.
Other
Januchowski-Hartley S, Holtz L, Martinuzzi S, McIntyre PB, Radeloff V, & Pracheil B. 2016. Future land use threats to range-restricted fish species in the United States. Diversity & Distributions 22: 663–671.
Koning AA, Moore J, Suttidate N, Hannigan R, & McIntyre PB. 2016. Intensification of swidden agriculture leads to eutrophication of Southeast Asian rivers. Ecosystems, in press.
Mason LA, Riseng CM, Gronewold AD, Rutherford ES, Wang J, Clites A, Smith SDP, & McIntyre PB. 2016. Fine-scale spatial variation in ice cover and surface temperature trends across the surface of the Laurentian Great Lakes. Climatic Change 138: 71-83.
Vanni MJ* & McIntyre PB*. 2016. Predicting nutrient excretion rates of aquatic animals using metabolic ecology and ecological stoichiometry: a global synthesis. Ecology 97: 3460-3471.
Allan JD, Smith SDP, McIntyre PB, Joseph CA, Dickinson CE, Marino AL, Biel RG, Olson JC, Doran PJ, Rutherford ES, Adkins JE, & Adeyemo AO. 2015. Using cultural ecosystem services to inform restoration priorities in the Laurentian Great Lakes. Frontiers in Ecology & Environment 13: 418-424.
Smith SDP, McIntyre PB, Halpern BS, Allan JD, & 15 others. 2015. Rating impacts in a multi-stressor world: a quantitative assessment of 50 stressors affecting the Great Lakes. Ecological Applications 25: 717–728.
El-Sabaawi RW, Travis J, Zandona E, McIntyre PB, Reznick DN, & Flecker AS. 2014. Intraspecific variability modulates interspecific variability in animal organismal stoichiometry. Ecology and Evolution 4: 1505-1515.
Pracheil B, Hogan J, Lyons J, & McIntyre PB. 2014. Using hard-part microchemistry to advance conservation and management of North American freshwater fishes. Fisheries 39: 451-465.
Vadeboncoeur Y, Devlin SP, McIntyre PB, & Vander Zanden MJ. 2014. Is there light after depth? Distribution of periphyton chlorophyll and productivity in lake littoral zones. Freshwater Science 33: 524-536.
Allan JD*, McIntyre PB*, Smith SDP*, Halpern BS, & 18 coauthors. 2013. Joint analysis of stressors and ecosystem services to enhance restoration effectiveness. Proceedings of the National Academy of Sciences 110: 372-377.
Collins S, Bickford N, McIntyre PB, Coulon A, Ulseth AJ, Taphorn DC, & Flecker AS. 2013. Population structure of a Neotropical migratory fish: contrasting perspectives from genes and otolith microchemistry. Transactions of the American Fisheries Society 142: 1192-1201.
Hansen GJA, Vander Zanden MJ, Blum MJ, Clayton MK, Hain EF, Hauxwell J, Izzo M, Kornis MS, McIntyre PB, Mikulyuk A, Nilsson E, Olden JD, Papeş M, & Sharma S. 2013. Commonly rare and rarely common: comparing population abundance of invasive and native aquatic species. PLOS One 8: e77415.
Pracheil BM, McIntyre PB, & Lyons JD. 2013. Enhancing conservation of large-river biodiversity by accounting for tributaries. Frontiers in Ecology & Environment 11: 124-128.
Vanni MJ, McIntyre PB, & Boros G. 2013. When are fish sources vs. sinks of nutrients in lake ecosystems? Ecology 94: 2195-2206.
Cooperman M, et al. 2012. A watershed moment for the Mekong. Cambodian Journal of Natural History 2012: 101-106.
Kwon SY, McIntyre PB, Flecker AS, & Campbell L. 2012. Mercury biomagnification in the food web of a Neotropical stream. Science of the Total Environment 417: 92-97.
Beard TD, Arlinghaus R, Cooke SJ, McIntyre PB, de Silva S, Bartley D & Cowx IG. 2011. Ecosystem approach to inland fisheries: research needs and implementation strategies. Biology Letters 7: 481-483.
Lavoué S, Miya M, Arnegard M, McIntyre PB, Mamonekene V & Nishida M. 2011. Remarkable morphological stasis in an extant vertebrate despite tens of millions of years of divergence. Proceedings of the Royal Society B 278: 1003-1008.
Arnegard ME, McIntyre PB, Harmon LJ, Zelditch ML, Crampton WGR, Davis JK, Sullivan JP, Lavoué S, & Hopkins CD. 2010. Sexual signal evolution outpaces ecological divergence during electric fish species radiation. American Naturalist 176: 335–356.
Bakker VJ, Baum J, Brodie J, Salomon A, Dickson B, Gibbs H, Jensen O, & McIntyre PB. 2010. The changing landscape of conservation science funding. Conservation Letters 3: 435-444.
Herbert M, McIntyre PB, Doran P, Allan D, & Abell R. 2010. Terrestrial reserve networks do not adequately represent aquatic ecosystems. Conservation Biology 24: 1002-1011.
Knoll L, McIntyre PB, Vanni MJ, & Flecker AS. 2009. Feedbacks of consumer nutrient recycling on producer biomass and stoichiometry: separating direct and indirect effects. Oikos 118: 1732-1742.
Moslemi JM, Capps KA, Johnson MS, Maul J, McIntyre PB, Melvin AM, Vadas TM, Vallano DM, Watkins JM, & Weiss M. 2009. Training tomorrow’s environmental problem-solvers: an integrative approach to graduate education. BioScience 59: 514-521.
Finkelstein M, Bakker V, Doak DF, Sullivan B, Lewison R, Satterthwaite WH, McIntyre PB, Wolf S, Priddel D, Arnold J, Henry RW, Sievert P, & Croxall J. 2008. Evaluating the potential effectiveness of compensatory mitigation strategies for marine bycatch. PLoS One 3: e2480.
McIntyre PB, Flecker A, Vanni M, Hood J, Taylor B & Thomas S. 2008. Fish distributions and nutrient recycling in a tropical stream: can fish create biogeochemical hotspots? Ecology 89: 2335-2346.
Duffy J, Cardinale B, France K, McIntyre P, Thebault E, & Loreau M. 2007. The functional role of biodiversity in ecosystems: incorporating trophic complexity. Ecology Letters 10: 522-538.
McIntyre PB, Jones L, Flecker A, & Vanni M. 2007. Fish extinctions alter nutrient recycling in tropical freshwaters. Proceedings of the National Academy of Sciences 104: 4461-4466.
McClure MM, McIntyre PB, & McCune AR. 2006. Notes on the natural diet and habitat of eight danionin fishes, including the zebrafish Danio rerio. J. Fish Biology 68: 1-18.
McIntyre PB, & Flecker AS. 2006. Rapid turnover of tissue nitrogen of primary consumers in tropical freshwaters. Oecologia 148: 12-21.
McIntyre PB, Baldwin S, & Flecker AS. 2004. Effects of behavioral and morphological plasticity on risk of predation in a Neotropical tadpole. Oecologia 141: 130-138.
Ramanamanjato JB, McIntyre PB, & Nussbaum RN. 2002. Reptile, amphibian, and lemur diversity of the Malahelo Forest, a biogeographic transition zone in southeastern Madagascar. Biodiversity and Conservation 11: 1791-1807.
McIntyre PB, & McCollum SA. 2000. Responses of bullfrog tadpoles to hypoxia and predators. Oecologia 125: 301-308.
Peterson CC, & McIntyre PB. 1998. Ontogenetic diet shifts in Roeboides affinis with
morphological comparisons. Environmental Biology of Fishes 53: 105-110.
Koning AA, Moore J, Suttidate N, Hannigan R, & McIntyre PB. 2016. Intensification of swidden agriculture leads to eutrophication of Southeast Asian rivers. Ecosystems, in press.
Mason LA, Riseng CM, Gronewold AD, Rutherford ES, Wang J, Clites A, Smith SDP, & McIntyre PB. 2016. Fine-scale spatial variation in ice cover and surface temperature trends across the surface of the Laurentian Great Lakes. Climatic Change 138: 71-83.
Vanni MJ* & McIntyre PB*. 2016. Predicting nutrient excretion rates of aquatic animals using metabolic ecology and ecological stoichiometry: a global synthesis. Ecology 97: 3460-3471.
Allan JD, Smith SDP, McIntyre PB, Joseph CA, Dickinson CE, Marino AL, Biel RG, Olson JC, Doran PJ, Rutherford ES, Adkins JE, & Adeyemo AO. 2015. Using cultural ecosystem services to inform restoration priorities in the Laurentian Great Lakes. Frontiers in Ecology & Environment 13: 418-424.
Smith SDP, McIntyre PB, Halpern BS, Allan JD, & 15 others. 2015. Rating impacts in a multi-stressor world: a quantitative assessment of 50 stressors affecting the Great Lakes. Ecological Applications 25: 717–728.
El-Sabaawi RW, Travis J, Zandona E, McIntyre PB, Reznick DN, & Flecker AS. 2014. Intraspecific variability modulates interspecific variability in animal organismal stoichiometry. Ecology and Evolution 4: 1505-1515.
Pracheil B, Hogan J, Lyons J, & McIntyre PB. 2014. Using hard-part microchemistry to advance conservation and management of North American freshwater fishes. Fisheries 39: 451-465.
Vadeboncoeur Y, Devlin SP, McIntyre PB, & Vander Zanden MJ. 2014. Is there light after depth? Distribution of periphyton chlorophyll and productivity in lake littoral zones. Freshwater Science 33: 524-536.
Allan JD*, McIntyre PB*, Smith SDP*, Halpern BS, & 18 coauthors. 2013. Joint analysis of stressors and ecosystem services to enhance restoration effectiveness. Proceedings of the National Academy of Sciences 110: 372-377.
Collins S, Bickford N, McIntyre PB, Coulon A, Ulseth AJ, Taphorn DC, & Flecker AS. 2013. Population structure of a Neotropical migratory fish: contrasting perspectives from genes and otolith microchemistry. Transactions of the American Fisheries Society 142: 1192-1201.
Hansen GJA, Vander Zanden MJ, Blum MJ, Clayton MK, Hain EF, Hauxwell J, Izzo M, Kornis MS, McIntyre PB, Mikulyuk A, Nilsson E, Olden JD, Papeş M, & Sharma S. 2013. Commonly rare and rarely common: comparing population abundance of invasive and native aquatic species. PLOS One 8: e77415.
Pracheil BM, McIntyre PB, & Lyons JD. 2013. Enhancing conservation of large-river biodiversity by accounting for tributaries. Frontiers in Ecology & Environment 11: 124-128.
Vanni MJ, McIntyre PB, & Boros G. 2013. When are fish sources vs. sinks of nutrients in lake ecosystems? Ecology 94: 2195-2206.
Cooperman M, et al. 2012. A watershed moment for the Mekong. Cambodian Journal of Natural History 2012: 101-106.
Kwon SY, McIntyre PB, Flecker AS, & Campbell L. 2012. Mercury biomagnification in the food web of a Neotropical stream. Science of the Total Environment 417: 92-97.
Beard TD, Arlinghaus R, Cooke SJ, McIntyre PB, de Silva S, Bartley D & Cowx IG. 2011. Ecosystem approach to inland fisheries: research needs and implementation strategies. Biology Letters 7: 481-483.
Lavoué S, Miya M, Arnegard M, McIntyre PB, Mamonekene V & Nishida M. 2011. Remarkable morphological stasis in an extant vertebrate despite tens of millions of years of divergence. Proceedings of the Royal Society B 278: 1003-1008.
Arnegard ME, McIntyre PB, Harmon LJ, Zelditch ML, Crampton WGR, Davis JK, Sullivan JP, Lavoué S, & Hopkins CD. 2010. Sexual signal evolution outpaces ecological divergence during electric fish species radiation. American Naturalist 176: 335–356.
Bakker VJ, Baum J, Brodie J, Salomon A, Dickson B, Gibbs H, Jensen O, & McIntyre PB. 2010. The changing landscape of conservation science funding. Conservation Letters 3: 435-444.
Herbert M, McIntyre PB, Doran P, Allan D, & Abell R. 2010. Terrestrial reserve networks do not adequately represent aquatic ecosystems. Conservation Biology 24: 1002-1011.
Knoll L, McIntyre PB, Vanni MJ, & Flecker AS. 2009. Feedbacks of consumer nutrient recycling on producer biomass and stoichiometry: separating direct and indirect effects. Oikos 118: 1732-1742.
Moslemi JM, Capps KA, Johnson MS, Maul J, McIntyre PB, Melvin AM, Vadas TM, Vallano DM, Watkins JM, & Weiss M. 2009. Training tomorrow’s environmental problem-solvers: an integrative approach to graduate education. BioScience 59: 514-521.
Finkelstein M, Bakker V, Doak DF, Sullivan B, Lewison R, Satterthwaite WH, McIntyre PB, Wolf S, Priddel D, Arnold J, Henry RW, Sievert P, & Croxall J. 2008. Evaluating the potential effectiveness of compensatory mitigation strategies for marine bycatch. PLoS One 3: e2480.
McIntyre PB, Flecker A, Vanni M, Hood J, Taylor B & Thomas S. 2008. Fish distributions and nutrient recycling in a tropical stream: can fish create biogeochemical hotspots? Ecology 89: 2335-2346.
Duffy J, Cardinale B, France K, McIntyre P, Thebault E, & Loreau M. 2007. The functional role of biodiversity in ecosystems: incorporating trophic complexity. Ecology Letters 10: 522-538.
McIntyre PB, Jones L, Flecker A, & Vanni M. 2007. Fish extinctions alter nutrient recycling in tropical freshwaters. Proceedings of the National Academy of Sciences 104: 4461-4466.
McClure MM, McIntyre PB, & McCune AR. 2006. Notes on the natural diet and habitat of eight danionin fishes, including the zebrafish Danio rerio. J. Fish Biology 68: 1-18.
McIntyre PB, & Flecker AS. 2006. Rapid turnover of tissue nitrogen of primary consumers in tropical freshwaters. Oecologia 148: 12-21.
McIntyre PB, Baldwin S, & Flecker AS. 2004. Effects of behavioral and morphological plasticity on risk of predation in a Neotropical tadpole. Oecologia 141: 130-138.
Ramanamanjato JB, McIntyre PB, & Nussbaum RN. 2002. Reptile, amphibian, and lemur diversity of the Malahelo Forest, a biogeographic transition zone in southeastern Madagascar. Biodiversity and Conservation 11: 1791-1807.
McIntyre PB, & McCollum SA. 2000. Responses of bullfrog tadpoles to hypoxia and predators. Oecologia 125: 301-308.
Peterson CC, & McIntyre PB. 1998. Ontogenetic diet shifts in Roeboides affinis with
morphological comparisons. Environmental Biology of Fishes 53: 105-110.
Book Chapters
Gelwick FP, & McIntyre PB. 2016. Trophic relations of stream fishes. In Hauer R & Lamberti G: Methods in Stream Ecology (3rd Ed.). Academic Press, New York.
McIntyre PB, Reidy Liermann C, Childress E, Hamann EJ, Hogan J, Januchowski-Hartley SR, Koning AA, Neeson TM, Oele DL, & Pracheil BM. 2015. Conservation of migratory fishes in freshwater ecosystems. In Closs G, Krkosek M, & Olden JD: Conservation of Freshwater Fishes. Cambridge University Press, Cambridge, UK.
McIntyre PB & Flecker AS. 2010. Ecological stoichiometry as an integrative framework in stream fish ecology. American Fisheries Society Symposium 73: 539–558.
Flecker AS, McIntyre PB, Moore JW, Anderson JT, Taylor BW, & Hall RO. 2010. Migratory fishes as material and process subsidies in riverine ecosystems. American Fisheries Society Symposium 73: 559–592.
McIntyre PB, Reidy Liermann C, Childress E, Hamann EJ, Hogan J, Januchowski-Hartley SR, Koning AA, Neeson TM, Oele DL, & Pracheil BM. 2015. Conservation of migratory fishes in freshwater ecosystems. In Closs G, Krkosek M, & Olden JD: Conservation of Freshwater Fishes. Cambridge University Press, Cambridge, UK.
McIntyre PB & Flecker AS. 2010. Ecological stoichiometry as an integrative framework in stream fish ecology. American Fisheries Society Symposium 73: 539–558.
Flecker AS, McIntyre PB, Moore JW, Anderson JT, Taylor BW, & Hall RO. 2010. Migratory fishes as material and process subsidies in riverine ecosystems. American Fisheries Society Symposium 73: 559–592.
